Parallel workflow tools to facilitate human brain MRI post-processing
نویسندگان
چکیده
Multi-modal magnetic resonance imaging (MRI) techniques are widely applied in human brain studies. To obtain specific brain measures of interest from MRI datasets, a number of complex image post-processing steps are typically required. Parallel workflow tools have recently been developed, concatenating individual processing steps and enabling fully automated processing of raw MRI data to obtain the final results. These workflow tools are also designed to make optimal use of available computational resources and to support the parallel processing of different subjects or of independent processing steps for a single subject. Automated, parallel MRI post-processing tools can greatly facilitate relevant brain investigations and are being increasingly applied. In this review, we briefly summarize these parallel workflow tools and discuss relevant issues.
منابع مشابه
STAMPS: Software Tool for Automated MRI Post-processing on a supercomputer
This paper describes a Software Tool for Automated MRI Post-processing (STAMP) of multiple types of brain MRIs on a workstation and for parallel processing on a supercomputer (STAMPS). This software tool enables the automation of nonlinear registration for a large image set and for multiple MR image types. The tool uses standard brain MRI post-processing tools (such as SPM, FSL, and HAMMER) for...
متن کاملBrain Volume Estimation Enhancement by Morphological Image Processing Tools
Background: Volume estimation of brain is important for many neurological applications. It is necessary in measuring brain growth and changes in brain in normal/abnormal patients. Thus, accurate brain volume measurement is very important. Magnetic resonance imaging (MRI) is the method of choice for volume quantification due to excellent levels of image resolution and between-tissue contrast. St...
متن کاملA Novel Fuzzy-C Means Image Segmentation Model for MRI Brain Tumor Diagnosis
Accurate segmentation of brain tumor plays a key role in the diagnosis of brain tumor. Preset and precise diagnosis of Magnetic Resonance Imaging (MRI) brain tumor is enormously significant for medical analysis. During the last years many methods have been proposed. In this research, a novel fuzzy approach has been proposed to classify a given MRI brain image as normal or cancer label and the i...
متن کاملMultiple Sclerosis Brain MRI Segmentation Workflow deployment on the EGEE Grid
Automatic brain MRI segmentations methods are useful but computationally intensive tools in medical image computing. Deploying them on grid infrastructures can provide an efficient resource for data handling and computing power. In this study, an efficient implementation of a brain MRI segmentation method through a grid-interfaced workflow enactor is proposed. The deployment of the workflow ena...
متن کاملWorkflows for Ultra-High Resolution 3D Models of the Human Brain on Massively Parallel Supercomputers
Human brain atlases [1] are indispensable tools to achieve a better understanding of the multilevel organization of the brain through integrating and analyzing data from different brains, sources, and modalities while considering the functionally relevant topography of the brain [4]. The spatial resolution of most of these electronic atlases is in the range of millimeters, which does not allow ...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
عنوان ژورنال:
دوره 9 شماره
صفحات -
تاریخ انتشار 2015